ChrUn.fgenesh.mRNA.78

Description : no hits & (original description: none)

Gene families : OG0001964 (Archaeplastida) Phylogenetic Tree(s): OG0001964_tree ,
OG_05_0001282 (LandPlants) Phylogenetic Tree(s): OG_05_0001282_tree ,
OG_06_0000665 (SeedPlants) Phylogenetic Tree(s): OG_06_0000665_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ChrUn.fgenesh.mRNA.78
Cluster	HCCA: Cluster_205

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os02g18530.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os02g26760.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os03g25560.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os03g29330.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
LOC_Os05g14480.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
LOC_Os07g22760.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os09g02040.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os09g18070.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os09g38170.1	No alias	no hits & (original description: none)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Neighborhood
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Neighborhood
BP	GO:0006595	polyamine metabolic process	IEP	Neighborhood
BP	GO:0006596	polyamine biosynthetic process	IEP	Neighborhood
BP	GO:0006597	spermine biosynthetic process	IEP	Neighborhood
BP	GO:0008215	spermine metabolic process	IEP	Neighborhood
BP	GO:0008216	spermidine metabolic process	IEP	Neighborhood
BP	GO:0008295	spermidine biosynthetic process	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0009309	amine biosynthetic process	IEP	Neighborhood
BP	GO:0015074	DNA integration	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Neighborhood
BP	GO:0044106	cellular amine metabolic process	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
BP	GO:0097164	ammonium ion metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002156	RNaseH_domain	29	114

External Links

No external refs found!