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  5. LOC_Os01g01420.2

LOC_Os01g01420.2


Description : Protein NCA1 OS=Arabidopsis thaliana (sp|q9m2v1|nca1_arath : 417.0)


Gene families : OG0006244 (Archaeplastida) Phylogenetic Tree(s): OG0006244_tree ,
OG_05_0007598 (LandPlants) Phylogenetic Tree(s): OG_05_0007598_tree ,
OG_06_0009031 (SeedPlants) Phylogenetic Tree(s): OG_06_0009031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01420.2
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT3G54360 No alias zinc ion binding 0.03 Archaeplastida
GSVIVT01027370001 No alias Protein NCA1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Pp3c4_17260V3.1 No alias zinc ion binding 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019734 TPR_repeat 228 255
No external refs found!