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  5. LOC_Os01g02110.1

LOC_Os01g02110.1


Description : transcription factor (bHLH)


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g02110.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.03 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.04 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.05 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.03 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.04 Archaeplastida
AT5G43175 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01022120001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01030846001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_12264 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_30839 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os11g41640.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_100071g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10156436g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_128707g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_29441g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp3g23300.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp6g21470.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo404767 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Smo405220 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Smo409967 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Smo413232 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc12g088790.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.12 Archaeplastida
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e018003_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.1 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 212 255
No external refs found!