LOC_Os01g03100.1

Description : RING-v-class E3 ligase

Gene families : OG0000436 (Archaeplastida) Phylogenetic Tree(s): OG0000436_tree ,
OG_05_0000506 (LandPlants) Phylogenetic Tree(s): OG_05_0000506_tree ,
OG_06_0008056 (SeedPlants) Phylogenetic Tree(s): OG_06_0008056_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g03100.1
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
Cre09.g400738	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	Archaeplastida
MA_10427291g0010	No alias	RING-v-class E3 ligase	0.02	Archaeplastida
Zm00001e009834_P004	No alias	RING-v-class E3 ligase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015693	magnesium ion transport	IEP	Neighborhood
MF	GO:0070569	uridylyltransferase activity	IEP	Neighborhood
BP	GO:0070838	divalent metal ion transport	IEP	Neighborhood
BP	GO:0072511	divalent inorganic cation transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	55	100
IPR022143	DUF3675	106	221

External Links

No external refs found!