LOC_Os01g03290.1

Description : Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana (sp|q9fkd9|sinl6_arath : 110.0)

Gene families : OG0015741 (Archaeplastida) Phylogenetic Tree(s): OG0015741_tree ,
OG_05_0015642 (LandPlants) Phylogenetic Tree(s): OG_05_0015642_tree ,
OG_06_0015354 (SeedPlants) Phylogenetic Tree(s): OG_06_0015354_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g03290.1
Cluster	HCCA: Cluster_70

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
CC	GO:0044217	other organism part	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	Neighborhood
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
MF	GO:0070566	adenylyltransferase activity	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018121	7-in-absentia-prot_TRAF-dom	90	165

External Links

No external refs found!

LOC_Os01g03290.1

Expression Profile

Co-expression Networks

Functional Annotation