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  5. AMTR_s00001p00271490

AMTR_s00001p00271490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.489

Description : Chromatin organisation.histones.H4-type histone


Gene families : OG0000170 (Archaeplastida) Phylogenetic Tree(s): OG0000170_tree ,
OG_05_0000135 (LandPlants) Phylogenetic Tree(s): OG_05_0000135_tree ,
OG_06_0000106 (SeedPlants) Phylogenetic Tree(s): OG_06_0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00271490
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00201000 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
AT1G07820 No alias Histone superfamily protein 0.03 Archaeplastida
AT2G28740 HIS4 histone H4 0.02 Archaeplastida
AT3G45930 No alias Histone superfamily protein 0.03 Archaeplastida
AT3G53730 No alias Histone superfamily protein 0.05 Archaeplastida
AT5G59690 No alias Histone superfamily protein 0.02 Archaeplastida
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.05 Archaeplastida
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.05 Archaeplastida
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.08 Archaeplastida
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.05 Archaeplastida
GSVIVT01016576001 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
GSVIVT01034208001 No alias Chromatin organisation.histones.H4-type histone 0.08 Archaeplastida
Gb_10373 No alias histone (H4) 0.03 Archaeplastida
Gb_15454 No alias histone (H4) 0.04 Archaeplastida
Gb_15455 No alias histone (H4) 0.03 Archaeplastida
Gb_15458 No alias histone (H4) 0.03 Archaeplastida
Gb_20453 No alias histone (H4) 0.07 Archaeplastida
Gb_21914 No alias histone (H4) 0.04 Archaeplastida
Gb_21918 No alias histone (H4) 0.04 Archaeplastida
Gb_25031 No alias histone (H4) 0.05 Archaeplastida
LOC_Os01g61920.1 No alias histone (H4) 0.03 Archaeplastida
LOC_Os02g45940.1 No alias histone (H4) 0.03 Archaeplastida
LOC_Os03g02780.1 No alias histone (H4) 0.03 Archaeplastida
LOC_Os05g39050.1 No alias histone (H4) 0.04 Archaeplastida
LOC_Os07g36500.1 No alias histone (H4) 0.03 Archaeplastida
LOC_Os09g26340.1 No alias histone (H4) 0.03 Archaeplastida
LOC_Os09g38020.1 No alias histone (H4) 0.04 Archaeplastida
MA_10433778g0010 No alias histone (H4) 0.04 Archaeplastida
MA_116904g0010 No alias histone (H4) 0.03 Archaeplastida
MA_234535g0010 No alias histone (H4) 0.02 Archaeplastida
MA_713159g0010 No alias histone (H4) 0.04 Archaeplastida
MA_74102g0010 No alias histone (H4) 0.03 Archaeplastida
Mp5g22460.1 No alias histone (H4) 0.02 Archaeplastida
Mp5g22470.1 No alias histone (H4) 0.02 Archaeplastida
Pp3c4_22160V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Solyc04g011390.1.1 No alias histone (H4) 0.05 Archaeplastida
Solyc05g054610.1.1 No alias histone (H4) 0.06 Archaeplastida
Solyc06g005420.1.1 No alias histone (H4) 0.05 Archaeplastida
Solyc06g005430.1.1 No alias histone (H4) 0.06 Archaeplastida
Solyc06g075830.2.1 No alias histone (H4) 0.05 Archaeplastida
Solyc06g075850.1.1 No alias histone (H4) 0.05 Archaeplastida
Solyc06g075960.1.1 No alias histone (H4) 0.07 Archaeplastida
Solyc11g066160.1.1 No alias histone (H4) 0.06 Archaeplastida
Solyc11g072840.1.1 No alias histone (H4) 0.04 Archaeplastida
Solyc11g072860.2.1 No alias histone (H4) 0.03 Archaeplastida
Zm00001e007138_P001 No alias histone (H4) 0.02 Archaeplastida
Zm00001e009859_P001 No alias histone (H4) 0.04 Archaeplastida
Zm00001e016816_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e019368_P001 No alias histone (H4) 0.08 Archaeplastida
Zm00001e023245_P001 No alias histone (H4) 0.07 Archaeplastida
Zm00001e025845_P001 No alias histone (H4) 0.02 Archaeplastida
Zm00001e027269_P001 No alias histone (H4) 0.02 Archaeplastida
Zm00001e034229_P001 No alias histone (H4) 0.02 Archaeplastida
Zm00001e034230_P001 No alias histone (H4) 0.07 Archaeplastida
Zm00001e034964_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e041377_P001 No alias histone (H4) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 28 94
No external refs found!