LOC_Os01g03400.1

Description : Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana (sp|q9fkd9|sinl6_arath : 84.7)

Gene families : OG0001805 (Archaeplastida) Phylogenetic Tree(s): OG0001805_tree ,
OG_05_0002175 (LandPlants) Phylogenetic Tree(s): OG_05_0002175_tree ,
OG_06_0008087 (SeedPlants) Phylogenetic Tree(s): OG_06_0008087_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g03400.1
Cluster	HCCA: Cluster_136

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00005p00265140	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
MF	GO:0008408	3'-5' exonuclease activity	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Neighborhood
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!