LOC_Os01g03650.1

Description : component SUF-D of plastidial SUF system assembly phase

Gene families : OG0004989 (Archaeplastida) Phylogenetic Tree(s): OG0004989_tree ,
OG_05_0005916 (LandPlants) Phylogenetic Tree(s): OG_05_0005916_tree ,
OG_06_0005806 (SeedPlants) Phylogenetic Tree(s): OG_06_0005806_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g03650.1
Cluster	HCCA: Cluster_327

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00022099.6	No alias	Coenzyme metabolism.iron-sulfur cluster assembly...	0.02	Archaeplastida
Cre12.g513950	No alias	Coenzyme metabolism.iron-sulfur cluster assembly...	0.02	Archaeplastida
GSVIVT01013180001	No alias	Coenzyme metabolism.iron-sulfur cluster assembly...	0.04	Archaeplastida
MA_10435278g0010	No alias	component SUF-D of plastidial SUF system assembly phase	0.03	Archaeplastida
Mp6g05530.1	No alias	component SUF-D of plastidial SUF system assembly phase	0.02	Archaeplastida
Solyc08g007010.4.1	No alias	component SUF-D of plastidial SUF system assembly phase	0.06	Archaeplastida
Zm00001e025738_P001	No alias	component SUF-D of plastidial SUF system assembly phase	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	IEA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0051186	cofactor metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
BP	GO:0001522	pseudouridine synthesis	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Neighborhood
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0009982	pseudouridine synthase activity	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0016866	intramolecular transferase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0052646	alditol phosphate metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000825	SUF_FeS_clus_asmbl_SufBD	222	449

External Links

No external refs found!

LOC_Os01g03650.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation