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  5. LOC_Os01g03730.1

LOC_Os01g03730.1


Description : Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 420.3) & Endonuclease 4 OS=Arabidopsis thaliana (sp|f4jjl0|endo4_arath : 343.0)


Gene families : OG0001168 (Archaeplastida) Phylogenetic Tree(s): OG0001168_tree ,
OG_05_0001313 (LandPlants) Phylogenetic Tree(s): OG_05_0001313_tree ,
OG_06_0001292 (SeedPlants) Phylogenetic Tree(s): OG_06_0001292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g03730.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G11190 BFN1, ENDO1 bifunctional nuclease i 0.06 Archaeplastida
Gb_25885 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.02 Archaeplastida
Mp4g07120.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.03 Archaeplastida
Pp3c15_1100V3.1 No alias endonuclease 4 0.02 Archaeplastida
Zm00001e025725_P001 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004519 endonuclease activity IEA Interproscan
BP GO:0006308 DNA catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004334 fumarylacetoacetase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Neighborhood
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003154 S1/P1nuclease 34 293
No external refs found!