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  5. LOC_Os01g03950.1

LOC_Os01g03950.1


Description : 1,6-alpha-xylosidase


Gene families : OG0001404 (Archaeplastida) Phylogenetic Tree(s): OG0001404_tree ,
OG_05_0001143 (LandPlants) Phylogenetic Tree(s): OG_05_0001143_tree ,
OG_06_0001020 (SeedPlants) Phylogenetic Tree(s): OG_06_0001020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g03950.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00035080 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.modification and... 0.02 Archaeplastida
AMTR_s00079p00038550 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.modification and... 0.05 Archaeplastida
GSVIVT01011904001 No alias Cell wall.hemicellulose.xyloglucan.modification and... 0.04 Archaeplastida
Gb_01074 No alias 1,6-alpha-xylosidase 0.02 Archaeplastida
Gb_06380 No alias 1,6-alpha-xylosidase 0.04 Archaeplastida
Pp3c10_1820V3.1 No alias alpha-xylosidase 1 0.03 Archaeplastida
Pp3c11_15920V3.1 No alias alpha-xylosidase 1 0.03 Archaeplastida
Pp3c1_13060V3.1 No alias alpha-xylosidase 1 0.02 Archaeplastida
Pp3c2_18590V3.1 No alias alpha-xylosidase 1 0.02 Archaeplastida
Pp3c7_14360V3.1 No alias alpha-xylosidase 1 0.02 Archaeplastida
Solyc02g069670.4.1 No alias Alpha-glucosidase OS=Spinacia oleracea... 0.04 Archaeplastida
Solyc04g007150.3.1 No alias 1,6-alpha-xylosidase 0.05 Archaeplastida
Solyc04g007160.1.1 No alias Alpha-xylosidase 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc05g009470.4.1 No alias 1,6-alpha-xylosidase 0.06 Archaeplastida
Zm00001e017022_P001 No alias 1,6-alpha-xylosidase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR031727 Gal_mutarotase_N 62 183
IPR000322 Glyco_hydro_31 275 767
IPR025887 Glyco_hydro_31_N_dom 186 253
No external refs found!