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  5. LOC_Os01g05010.1

LOC_Os01g05010.1


Description : Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana (sp|q8w487|yb95_arath : 171.0)


Gene families : OG0000745 (Archaeplastida) Phylogenetic Tree(s): OG0000745_tree ,
OG_05_0000781 (LandPlants) Phylogenetic Tree(s): OG_05_0000781_tree ,
OG_06_0001928 (SeedPlants) Phylogenetic Tree(s): OG_06_0001928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g05010.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00104470 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.04 Archaeplastida
AMTR_s00159p00078560 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT2G39795 No alias Mitochondrial glycoprotein family protein 0.03 Archaeplastida
AT2G41600 No alias Mitochondrial glycoprotein family protein 0.04 Archaeplastida
AT3G55605 No alias Mitochondrial glycoprotein family protein 0.08 Archaeplastida
AT4G31930 No alias Mitochondrial glycoprotein family protein 0.03 Archaeplastida
AT5G02050 No alias Mitochondrial glycoprotein family protein 0.13 Archaeplastida
Cre10.g447100 No alias No description available 0.02 Archaeplastida
GSVIVT01016468001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.09 Archaeplastida
GSVIVT01017565001 No alias No description available 0.03 Archaeplastida
Gb_00756 No alias Uncharacterized protein At2g39795, mitochondrial... 0.02 Archaeplastida
Gb_30186 No alias Uncharacterized protein At2g39795, mitochondrial... 0.04 Archaeplastida
MA_10427007g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_123491g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.1 Archaeplastida
MA_5294g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.04 Archaeplastida
Mp1g21440.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c12_23320V3.1 No alias Mitochondrial glycoprotein family protein 0.05 Archaeplastida
Solyc03g079930.3.1 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 Archaeplastida
Solyc03g117080.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g011250.3.1 No alias Uncharacterized protein At2g39795, mitochondrial... 0.02 Archaeplastida
Zm00001e004097_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016932_P001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.07 Archaeplastida
Zm00001e036951_P001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
CC GO:0000313 organellar ribosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Neighborhood
MF GO:0004819 glutamine-tRNA ligase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005761 mitochondrial ribosome IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003428 MAM33 72 262
No external refs found!