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  5. AMTR_s00001p00272260

AMTR_s00001p00272260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.510

Description : Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000711 (Archaeplastida) Phylogenetic Tree(s): OG0000711_tree ,
OG_05_0002739 (LandPlants) Phylogenetic Tree(s): OG_05_0002739_tree ,
OG_06_0003149 (SeedPlants) Phylogenetic Tree(s): OG_06_0003149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00272260
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.13 Archaeplastida
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.12 Archaeplastida
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.11 Archaeplastida
GSVIVT01027036001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
GSVIVT01027447001 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.06 Archaeplastida
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
LOC_Os01g55570.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g49870.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 Archaeplastida
LOC_Os02g52260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g15400.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.1 Archaeplastida
LOC_Os07g28610.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.12 Archaeplastida
LOC_Os10g39150.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.05 Archaeplastida
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.1 Archaeplastida
MA_734271g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_904218g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.14 Archaeplastida
Mp6g20800.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.14 Archaeplastida
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.12 Archaeplastida
Pp3c16_11960V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c17_14680V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c17_14681V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c20_4990V3.1 No alias No annotation 0.13 Archaeplastida
Pp3c23_20770V3.1 No alias No annotation 0.08 Archaeplastida
Pp3c8_17810V3.1 No alias No annotation 0.01 Archaeplastida
Smo49217 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 Archaeplastida
Solyc01g095430.3.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.11 Archaeplastida
Solyc06g066620.4.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.07 Archaeplastida
Solyc10g005050.3.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.13 Archaeplastida
Solyc10g011770.4.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 Archaeplastida
Solyc11g010480.2.1 No alias Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.07 Archaeplastida
Zm00001e000193_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Zm00001e002212_P002 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.08 Archaeplastida
Zm00001e023473_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 Archaeplastida
Zm00001e023828_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e029009_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e030948_P002 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Zm00001e034870_P002 No alias no hits & (original description: none) 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005960 glycine cleavage complex IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025564 CAAD_dom 90 174
No external refs found!