1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g06140.1

LOC_Os01g06140.1


Description : no hits & (original description: none)


Gene families : OG0000416 (Archaeplastida) Phylogenetic Tree(s): OG0000416_tree ,
OG_05_0000238 (LandPlants) Phylogenetic Tree(s): OG_05_0000238_tree ,
OG_06_0020375 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g06140.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AT3G09120 No alias Protein of unknown function (DUF674) 0.06 Archaeplastida
AT3G09140 No alias Protein of unknown function (DUF674) 0.03 Archaeplastida
AT5G01150 No alias Protein of unknown function (DUF674) 0.07 Archaeplastida
AT5G37320 No alias Protein of unknown function (DUF674) 0.02 Archaeplastida
AT5G43240 No alias Protein of unknown function (DUF674) 0.03 Archaeplastida
Gb_20221 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007081_P003 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e007083_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e016867_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016868_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e016869_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016881_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR007750 DUF674 4 232
No external refs found!