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  5. LOC_Os01g06320.1

LOC_Os01g06320.1


Description : transcription factor (MYB-related). REVEILLE circadian clock factor


Gene families : OG0000637 (Archaeplastida) Phylogenetic Tree(s): OG0000637_tree ,
OG_05_0000630 (LandPlants) Phylogenetic Tree(s): OG_05_0000630_tree ,
OG_06_0000581 (SeedPlants) Phylogenetic Tree(s): OG_06_0000581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g06320.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00261430 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.evening element... 0.03 Archaeplastida
AT5G37260 RVE2, CIR1 Homeodomain-like superfamily protein 0.03 Archaeplastida
Cre06.g275350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Zm00001e020531_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 32 76
No external refs found!