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  5. AMTR_s00001p00272380

AMTR_s00001p00272380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.522

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0010898 (Archaeplastida) Phylogenetic Tree(s): OG0010898_tree ,
OG_05_0010456 (LandPlants) Phylogenetic Tree(s): OG_05_0010456_tree ,
OG_06_0006399 (SeedPlants) Phylogenetic Tree(s): OG_06_0006399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00272380
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01037874001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os03g10890.1 No alias Probable E3 ubiquitin-protein ligase RHY1A... 0.03 Archaeplastida
Solyc01g107290.3.1 No alias Probable E3 ubiquitin-protein ligase RHY1A... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 226 270
No external refs found!