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  5. LOC_Os01g07400.1

LOC_Os01g07400.1


Description : component ATG18 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG0001600 (Archaeplastida) Phylogenetic Tree(s): OG0001600_tree ,
OG_05_0001405 (LandPlants) Phylogenetic Tree(s): OG_05_0001405_tree ,
OG_06_0001795 (SeedPlants) Phylogenetic Tree(s): OG_06_0001795_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g07400.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010945001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.04 Archaeplastida
Mp1g05420.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.01 Archaeplastida
Pp3c17_4970V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
Zm00001e028371_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 263 288
No external refs found!