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  5. LOC_Os01g07870.1

LOC_Os01g07870.1


Description : subfamily ABCC transporter


Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0000437 (LandPlants) Phylogenetic Tree(s): OG_05_0000437_tree ,
OG_06_0000372 (SeedPlants) Phylogenetic Tree(s): OG_06_0000372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g07870.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G30420 ATMRP12, MRP12, ABCC11 multidrug resistance-associated protein 12 0.03 Archaeplastida
Cre13.g564900 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Cre17.g734612 No alias ABC transporter C family member 14 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01014634001 No alias ABC transporter C family member 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os06g06440.1 No alias subfamily ABCC transporter 0.07 Archaeplastida
MA_275824g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g11950.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Mp5g13230.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Smo144775 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo163772 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo163776 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo402326 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Solyc07g065320.4.1 No alias subfamily ABCC transporter 0.04 Archaeplastida
Solyc10g024420.3.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Zm00001e003542_P001 No alias subfamily ABCC transporter 0.05 Archaeplastida
Zm00001e038918_P002 No alias subfamily ABCC transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 654 788
IPR011527 ABC1_TM_dom 326 587
IPR011527 ABC1_TM_dom 945 1187
IPR003439 ABC_transporter-like 1279 1427
No external refs found!