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  5. LOC_Os01g08160.1

LOC_Os01g08160.1


Description : G2-like GARP transcription factor


Gene families : OG0001192 (Archaeplastida) Phylogenetic Tree(s): OG0001192_tree ,
OG_05_0000884 (LandPlants) Phylogenetic Tree(s): OG_05_0000884_tree ,
OG_06_0000674 (SeedPlants) Phylogenetic Tree(s): OG_06_0000674_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g08160.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00127250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
AT1G13300 HRS1 myb-like transcription factor family protein 0.02 Archaeplastida
AT2G03500 No alias Homeodomain-like superfamily protein 0.1 Archaeplastida
AT3G25790 No alias myb-like transcription factor family protein 0.04 Archaeplastida
AT4G37180 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01003551001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01011942001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01015462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Gb_34639 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c15_4480V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Solyc12g006800.2.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e003080_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e016724_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!