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  5. LOC_Os01g08610.1

LOC_Os01g08610.1


Description : no hits & (original description: none)


Gene families : OG0000552 (Archaeplastida) Phylogenetic Tree(s): OG0000552_tree ,
OG_05_0000432 (LandPlants) Phylogenetic Tree(s): OG_05_0000432_tree ,
OG_06_0000421 (SeedPlants) Phylogenetic Tree(s): OG_06_0000421_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g08610.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g27020.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g27290.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025398 DUF4371 172 407
IPR008906 HATC_C_dom 747 805
No external refs found!