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  5. LOC_Os01g09640.1

LOC_Os01g09640.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000426 (LandPlants) Phylogenetic Tree(s): OG_05_0000426_tree ,
OG_06_0000467 (SeedPlants) Phylogenetic Tree(s): OG_06_0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g09640.1
Cluster HCCA: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00066140 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G19000 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT1G70000 No alias myb-like transcription factor family protein 0.03 Archaeplastida
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G11280 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.04 Archaeplastida
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G56840 No alias myb-like transcription factor family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000455.6 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01008241001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01013871001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015223001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01018944001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024794001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01034001001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_05002 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Gb_28483 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g09280.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g64360.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os04g27410.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g37060.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_10432538g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_17466g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_41803g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_7049680g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_957399g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Pp3c26_6730V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c9_19080V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Smo439294 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo84280 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc03g119740.3.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc04g080500.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc06g034030.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Solyc08g065380.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc11g006720.2.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e006540_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e025946_P002 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028003_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e031755_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e032519_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e032520_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004334 fumarylacetoacetase activity IEP Neighborhood
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006559 L-phenylalanine catabolic process IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Neighborhood
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 125 169
No external refs found!