- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (TCP)
Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g11550.1 | |
| Cluster | HCCA: Cluster_234 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00158020 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.TCP... | 0.05 | Archaeplastida | |
| AT1G30210 | ATTCP24, TCP24 | TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 | 0.04 | Archaeplastida | |
| AT1G68800 | TCP12, BRC2 | TCP domain protein 12 | 0.05 | Archaeplastida | |
| AT3G18550 | BRC1, ATTCP18, TCP18 | TCP family transcription factor | 0.03 | Archaeplastida | |
| AT4G18390 | TCP2 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 | 0.04 | Archaeplastida | |
| GSVIVT01008109001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | Archaeplastida | |
| GSVIVT01011962001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.05 | Archaeplastida | |
| GSVIVT01014236001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | Archaeplastida | |
| GSVIVT01021167001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | Archaeplastida | |
| GSVIVT01021528001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.05 | Archaeplastida | |
| LOC_Os01g55750.1 | No alias | transcription factor (TCP) | 0.03 | Archaeplastida | |
| LOC_Os03g57190.1 | No alias | transcription factor (TCP) | 0.04 | Archaeplastida | |
| LOC_Os07g05720.1 | No alias | transcription factor (TCP) | 0.03 | Archaeplastida | |
| MA_189502g0010 | No alias | transcription factor (TCP) | 0.04 | Archaeplastida | |
| MA_37369g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Solyc02g077250.2.1 | No alias | transcription factor (TCP) | 0.03 | Archaeplastida | |
| Solyc04g006980.1.1 | No alias | transcription factor (TCP) | 0.02 | Archaeplastida | |
| Solyc05g009900.3.1 | No alias | transcription factor (TCP) | 0.03 | Archaeplastida | |
| Solyc12g014140.3.1 | No alias | transcription factor (TCP) | 0.04 | Archaeplastida | |
| Zm00001e005407_P001 | No alias | transcription factor (TCP) | 0.02 | Archaeplastida | |
| Zm00001e005909_P001 | No alias | transcription factor (TCP) | 0.09 | Archaeplastida | |
| Zm00001e011516_P001 | No alias | transcription factor (TCP) | 0.06 | Archaeplastida | |
| Zm00001e011911_P001 | No alias | transcription factor (TCP) | 0.11 | Archaeplastida | |
| Zm00001e012216_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e019734_P001 | No alias | transcription factor (TCP) | 0.03 | Archaeplastida | |
| Zm00001e022442_P001 | No alias | transcription factor (TCP) | 0.02 | Archaeplastida | |
| Zm00001e032122_P001 | No alias | transcription factor (TCP) | 0.04 | Archaeplastida | |
| Zm00001e032821_P001 | No alias | transcription factor (TCP) | 0.14 | Archaeplastida | |
| Zm00001e035648_P002 | No alias | transcription factor (TCP) | 0.11 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 87 | 152 |
| No external refs found! |