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  5. LOC_Os01g12690.1

LOC_Os01g12690.1


Description : transcription factor (OFP)


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000120 (SeedPlants) Phylogenetic Tree(s): OG_06_0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12690.1
Cluster HCCA: Cluster_345

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00234860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
AT2G36026 No alias Ovate family protein 0.03 Archaeplastida
AT2G36050 ATOFP15, OFP15 ovate family protein 15 0.02 Archaeplastida
AT4G04025 No alias No description available 0.03 Archaeplastida
GSVIVT01034649001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
LOC_Os05g12808.1 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_10434319g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
MA_2468787g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_61037g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
Pp3c14_21750V3.1 No alias ovate family protein 4 0.03 Archaeplastida
Pp3c18_15340V3.1 No alias ovate family protein 4 0.04 Archaeplastida
Solyc01g007810.1.1 No alias transcription factor (OFP) 0.04 Archaeplastida
Solyc09g065350.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g082080.1.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e000779_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e001591_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e004736_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e016408_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e019825_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e025928_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e031917_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e039401_P001 No alias transcription factor (OFP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP Neighborhood
CC GO:0000931 gamma-tubulin large complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
CC GO:0008274 gamma-tubulin ring complex IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031503 protein-containing complex localization IEP Neighborhood
BP GO:0033566 gamma-tubulin complex localization IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034629 cellular protein-containing complex localization IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044450 microtubule organizing center part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 335 391
No external refs found!