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  5. LOC_Os01g13000.1

LOC_Os01g13000.1


Description : transcription factor (bHLH)


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0000255 (SeedPlants) Phylogenetic Tree(s): OG_06_0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g13000.1
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00167p00019840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT1G49830 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT3G20640 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01005301001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01014542001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_07584 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc02g079760.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc03g120530.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc07g020960.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc07g063830.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc10g006640.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e014179_P003 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!