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  5. LOC_Os01g15020.1

LOC_Os01g15020.1


Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG0000601 (Archaeplastida) Phylogenetic Tree(s): OG0000601_tree ,
OG_05_0000851 (LandPlants) Phylogenetic Tree(s): OG_05_0000851_tree ,
OG_06_0000882 (SeedPlants) Phylogenetic Tree(s): OG_06_0000882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g15020.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00159380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 Archaeplastida
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 Archaeplastida
GSVIVT01017487001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.07 Archaeplastida
GSVIVT01031186001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 Archaeplastida
Solyc01g100050.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
Solyc03g117360.4.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
Zm00001e025577_P001 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 910 942
IPR001680 WD40_repeat 439 475
No external refs found!