Description : Pentatricopeptide repeat-containing protein At5g57250, mitochondrial OS=Arabidopsis thaliana (sp|q9lvd3|pp434_arath : 447.0)
Gene families : OG0013971 (Archaeplastida) Phylogenetic Tree(s): OG0013971_tree ,
OG_05_0013884 (LandPlants) Phylogenetic Tree(s): OG_05_0013884_tree ,
OG_06_0012083 (SeedPlants) Phylogenetic Tree(s): OG_06_0012083_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os01g15840.1 | |
Cluster | HCCA: Cluster_167 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Smo420401 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005488 | binding | IEP | Neighborhood |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0016597 | amino acid binding | IEP | Neighborhood |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Neighborhood |
MF | GO:0031406 | carboxylic acid binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0043177 | organic acid binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 990 | 1019 |
IPR002885 | Pentatricopeptide_repeat | 885 | 918 |
IPR002885 | Pentatricopeptide_repeat | 924 | 973 |
IPR002885 | Pentatricopeptide_repeat | 613 | 661 |
IPR002885 | Pentatricopeptide_repeat | 520 | 561 |
IPR002885 | Pentatricopeptide_repeat | 684 | 728 |
IPR002885 | Pentatricopeptide_repeat | 443 | 491 |
IPR002885 | Pentatricopeptide_repeat | 376 | 405 |
IPR002885 | Pentatricopeptide_repeat | 1035 | 1056 |
IPR002885 | Pentatricopeptide_repeat | 1069 | 1094 |
IPR002885 | Pentatricopeptide_repeat | 304 | 333 |
No external refs found! |