Description : Actin-related protein 6 OS=Oryza sativa subsp. japonica (sp|q5nbi2|arp6_orysj : 800.0)
Gene families : OG0006013 (Archaeplastida) Phylogenetic Tree(s): OG0006013_tree ,
OG_05_0007822 (LandPlants) Phylogenetic Tree(s): OG_05_0007822_tree ,
OG_06_0008678 (SeedPlants) Phylogenetic Tree(s): OG_06_0008678_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os01g16414.4 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Zm00001e039831_P005 | No alias | component ARP6 of SWR1 chromatin remodeling complex | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003909 | DNA ligase activity | IEP | Neighborhood |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Neighborhood |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Neighborhood |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
MF | GO:0008483 | transaminase activity | IEP | Neighborhood |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
MF | GO:0010181 | FMN binding | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
MF | GO:0016160 | amylase activity | IEP | Neighborhood |
MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
BP | GO:0016485 | protein processing | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Neighborhood |
MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Neighborhood |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
CC | GO:0030117 | membrane coat | IEP | Neighborhood |
CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
CC | GO:0030127 | COPII vesicle coat | IEP | Neighborhood |
BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
BP | GO:0051604 | protein maturation | IEP | Neighborhood |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
CC | GO:0070531 | BRCA1-A complex | IEP | Neighborhood |
CC | GO:0070552 | BRISC complex | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
BP | GO:0071586 | CAAX-box protein processing | IEP | Neighborhood |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004000 | Actin | 5 | 428 |
No external refs found! |