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  5. LOC_Os01g17396.2

LOC_Os01g17396.2


Description : no hits & (original description: none)


Gene families : OG0001777 (Archaeplastida) Phylogenetic Tree(s): OG0001777_tree ,
OG_05_0001310 (LandPlants) Phylogenetic Tree(s): OG_05_0001310_tree ,
OG_06_0020418 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g17396.2
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00159320 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AT3G12320 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 Archaeplastida
AT3G54500 No alias BEST Arabidopsis thaliana protein match is: dentin... 0.03 Archaeplastida
AT5G06980 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 Archaeplastida
AT5G64170 No alias dentin sialophosphoprotein-related 0.04 Archaeplastida
GSVIVT01003080001 No alias Protein LNK1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01003081001 No alias Multi-process regulation.circadian clock.evening element... 0.08 Archaeplastida
GSVIVT01036604001 No alias No description available 0.03 Archaeplastida
Gb_36250 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10428838g0010 No alias LNK circadian clock transcriptional co-activator 0.04 Archaeplastida
Pp3c13_6620V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c3_2690V3.1 No alias No annotation 0.04 Archaeplastida
Smo417164 No alias No description available 0.03 Archaeplastida
Smo440439 No alias Multi-process regulation.circadian clock.evening element... 0.04 Archaeplastida
Solyc01g068560.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g096630.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g105120.4.1 No alias LNK circadian clock transcriptional co-activator 0.08 Archaeplastida
Solyc04g009050.4.1 No alias LNK circadian clock transcriptional co-activator 0.07 Archaeplastida
Zm00001e001871_P006 No alias LNK circadian clock transcriptional co-activator 0.05 Archaeplastida
Zm00001e025468_P002 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e037970_P002 No alias LNK circadian clock transcriptional co-activator 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!