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  5. LOC_Os01g18200.1

LOC_Os01g18200.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g18200.1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g24530.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os01g29710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g01420.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g08280.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os02g25370.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os02g25520.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os02g37730.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g25200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g30080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g31910.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g29440.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g40240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g43590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g14460.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g18990.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g27860.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g21000.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g30570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g35350.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g26070.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g17120.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g24590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g13560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g13900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g15610.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g20450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g10440.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g17410.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g19550.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g31180.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g25300.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g28740.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g33060.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!