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  5. AMTR_s00002p00041060

AMTR_s00002p00041060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.15

Description : Nutrient uptake.copper uptake.regulation.bHLH-Ib iron/copper homeostasis regulator


Gene families : OG0003858 (Archaeplastida) Phylogenetic Tree(s): OG0003858_tree ,
OG_05_0002668 (LandPlants) Phylogenetic Tree(s): OG_05_0002668_tree ,
OG_06_0001945 (SeedPlants) Phylogenetic Tree(s): OG_06_0001945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00041060
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
MA_68586g0010 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 Archaeplastida
MA_716662g0010 No alias No annotation 0.03 Archaeplastida
MA_93509g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g079650.2.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.04 Archaeplastida
Solyc10g079660.3.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.04 Archaeplastida
Zm00001e018588_P001 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 48 101
No external refs found!