LOC_Os01g20110.1


Description : Uncharacterized protein At4g37920 OS=Arabidopsis thaliana (sp|q84wn0|y4920_arath : 419.0)


Gene families : OG0002455 (Archaeplastida) Phylogenetic Tree(s): OG0002455_tree ,
OG_05_0002243 (LandPlants) Phylogenetic Tree(s): OG_05_0002243_tree ,
OG_06_0002278 (SeedPlants) Phylogenetic Tree(s): OG_06_0002278_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g20110.1
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00223650 evm_27.TU.AmTr_v1... Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00046p00227230 evm_27.TU.AmTr_v1... Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT4G37920 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 Archaeplastida
Cpa|evm.model.tig00020537.60 No alias No description available 0.02 Archaeplastida
Cre18.g748397 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01003846001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01008964001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 Archaeplastida
Mp6g13740.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.08 Archaeplastida
Pp3c11_3060V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c4_22680V3.1 No alias No annotation 0.01 Archaeplastida
Smo77953 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g091640.3.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e029280_P001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004817 cysteine-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!