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  5. LOC_Os01g22870.1

LOC_Os01g22870.1


Description : ECHIDNA protein of trans-Golgi-network (TGN) trafficking


Gene families : OG0002293 (Archaeplastida) Phylogenetic Tree(s): OG0002293_tree ,
OG_05_0002612 (LandPlants) Phylogenetic Tree(s): OG_05_0002612_tree ,
OG_06_0003849 (SeedPlants) Phylogenetic Tree(s): OG_06_0003849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g22870.1
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
Cre16.g683250 No alias Vesicle trafficking.endomembrane... 0.01 Archaeplastida
Pp3c4_27310V3.1 No alias No annotation 0.04 Archaeplastida
Zm00001e017578_P001 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.02 Archaeplastida
Zm00001e027476_P002 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR008564 TVP23-like 13 152
No external refs found!