LOC_Os01g24070.1

Description : transcription factor (GATA)

Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000264 (SeedPlants) Phylogenetic Tree(s): OG_06_0000264_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g24070.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00064p00107710	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.01	Archaeplastida
AT3G06740	GATA15	GATA transcription factor 15	0.04	Archaeplastida
AT3G24050	GATA1	GATA transcription factor 1	0.11	Archaeplastida
GSVIVT01016265001	No alias	GATA transcription factor 8 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01024194001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Gb_24250	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os12g42970.1	No alias	transcription factor (GATA)	0.01	Archaeplastida
Solyc04g015360.3.1	No alias	transcription factor (GATA)	0.01	Archaeplastida
Zm00001e015260_P001	No alias	transcription factor (GATA)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	21	55

External Links

No external refs found!

LOC_Os01g24070.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation