LOC_Os01g25386.1

Description : subfamily ABCC transporter

Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0001822 (LandPlants) Phylogenetic Tree(s): OG_05_0001822_tree ,
OG_06_0004319 (SeedPlants) Phylogenetic Tree(s): OG_06_0004319_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g25386.1
Cluster	HCCA: Cluster_180

Target	Alias	Description	ECC score	Gene Family Method
AT3G13080	ABCC3, ATMRP3, MRP3	multidrug resistance-associated protein 3	0.04	Archaeplastida
AT3G60970	MRP15, ABCC15, ATMRP15	multidrug resistance-associated protein 15	0.03	Archaeplastida
Cpa\|evm.model.tig00000681.7	No alias	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.01	Archaeplastida
Cpa\|evm.model.tig00000718.1	No alias	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cre03.g174050	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01019467001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01019476001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01028722001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Gb_37462	No alias	subfamily ABCC transporter	0.03	Archaeplastida
LOC_Os03g04920.1	No alias	subfamily ABCC transporter	0.04	Archaeplastida
Mp4g15590.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Smo171469	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo99030	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc07g065320.4.1	No alias	subfamily ABCC transporter	0.04	Archaeplastida
Solyc08g006880.3.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Solyc09g075020.3.1	No alias	subfamily ABCC transporter	0.04	Archaeplastida
Solyc10g024420.3.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Zm00001e026288_P002	No alias	subfamily ABCC transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004525	ribonuclease III activity	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006721	terpenoid metabolic process	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0016114	terpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	Neighborhood
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	1004	1208
IPR011527	ABC1_TM_dom	349	614
IPR003439	ABC_transporter-like	1302	1450
IPR003439	ABC_transporter-like	683	816

External Links

No external refs found!

LOC_Os01g25386.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation