LOC_Os01g27150.1

Description : scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3 ligase complexes

Gene families : OG0001282 (Archaeplastida) Phylogenetic Tree(s): OG0001282_tree ,
OG_05_0001376 (LandPlants) Phylogenetic Tree(s): OG_05_0001376_tree ,
OG_06_0000966 (SeedPlants) Phylogenetic Tree(s): OG_06_0000966_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g27150.1
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
Gb_16689	No alias	scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3...	0.02	Archaeplastida
Zm00001e027502_P001	No alias	scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3...	0.02	Archaeplastida
Zm00001e040431_P004	No alias	scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016409	palmitoyltransferase activity	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0045927	positive regulation of growth	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001373	Cullin_N	15	647
IPR019559	Cullin_neddylation_domain	674	736

External Links

No external refs found!