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  5. LOC_Os01g27720.1

LOC_Os01g27720.1


Description : Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana (sp|q9lfh6|lul2_arath : 229.0)


Gene families : OG0001224 (Archaeplastida) Phylogenetic Tree(s): OG0001224_tree ,
OG_05_0001305 (LandPlants) Phylogenetic Tree(s): OG_05_0001305_tree ,
OG_06_0025658 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g27720.1
Cluster HCCA: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
Gb_23799 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e001085_P001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!