LOC_Os01g27740.3


Description : no hits & (original description: none)


Gene families : OG0000255 (Archaeplastida) Phylogenetic Tree(s): OG0000255_tree ,
OG_05_0002826 (LandPlants) Phylogenetic Tree(s): OG_05_0002826_tree ,
OG_06_0002013 (SeedPlants) Phylogenetic Tree(s): OG_06_0002013_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g27740.3
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00023650 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00013p00055400 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT4G19590 No alias Chaperone DnaJ-domain superfamily protein 0.03 Archaeplastida
AT5G18750 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Archaeplastida
AT5G27240 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
GSVIVT01017824001 No alias No description available 0.05 Archaeplastida
GSVIVT01028708001 No alias No description available 0.05 Archaeplastida
GSVIVT01030061001 No alias No description available 0.04 Archaeplastida
Gb_00839 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_17193 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10434613g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434613g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_96489g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c10_9830V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 Archaeplastida
Pp3c17_2560V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.05 Archaeplastida
Smo122991 No alias No description available 0.02 Archaeplastida
Solyc05g040050.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g029220.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e008360_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e017660_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e025632_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e025633_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e028433_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e033340_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e040755_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e041002_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR024593 DUF3444 780 982
IPR024593 DUF3444 492 696
IPR001623 DnaJ_domain 67 128
No external refs found!