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  5. AMTR_s00002p00109470

AMTR_s00002p00109470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.67

Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpS adaptor component


Gene families : OG0005375 (Archaeplastida) Phylogenetic Tree(s): OG0005375_tree ,
OG_05_0007305 (LandPlants) Phylogenetic Tree(s): OG_05_0007305_tree ,
OG_06_0008223 (SeedPlants) Phylogenetic Tree(s): OG_06_0008223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00109470
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Zm00001e004147_P001 No alias adaptor component ClpS of chloroplast Clp-type protease complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030163 protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
InterPro domains Description Start Stop
IPR003769 ClpS_core 76 148
No external refs found!