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  5. LOC_Os01g33070.1

LOC_Os01g33070.1


Description : Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidopsis thaliana (sp|q9fjy9|pp448_arath : 205.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0014034 (LandPlants) Phylogenetic Tree(s): OG_05_0014034_tree ,
OG_06_0013967 (SeedPlants) Phylogenetic Tree(s): OG_06_0013967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g33070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00232800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.06 Archaeplastida
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
GSVIVT01021576001 No alias DNA damage response.BRCA1–BARD1 DNA-damage response... 0.01 Archaeplastida
LOC_Os01g27650.1 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 Archaeplastida
Smo123298 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Solyc06g062610.2.1 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 227
IPR002885 Pentatricopeptide_repeat 237 264
IPR002885 Pentatricopeptide_repeat 47 70
IPR002885 Pentatricopeptide_repeat 171 198
No external refs found!