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  5. LOC_Os01g34060.1

LOC_Os01g34060.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0000376 (SeedPlants) Phylogenetic Tree(s): OG_06_0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g34060.1
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00096080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT1G74840 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT5G58900 No alias Homeodomain-like transcriptional regulator 0.03 Archaeplastida
GSVIVT01009723001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_38078 No alias transcription factor (MYB-related) 0.06 Archaeplastida
LOC_Os05g37040.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e017388_P001 No alias transcription factor (MYB-related) 0.1 Archaeplastida
Zm00001e025783_P002 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e042486_P001 No alias transcription factor (MYB-related) 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 143 187
No external refs found!