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  5. AMTR_s00002p00133420

AMTR_s00002p00133420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.93

Description : RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.nMAT1/2 type-I splicing factor


Gene families : OG0004888 (Archaeplastida) Phylogenetic Tree(s): OG0004888_tree ,
OG_05_0003570 (LandPlants) Phylogenetic Tree(s): OG_05_0003570_tree ,
OG_06_0003926 (SeedPlants) Phylogenetic Tree(s): OG_06_0003926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00133420
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Gb_04055 No alias nMAT1/2 type-I mitochondrial RNA splicing factor 0.04 Archaeplastida
MA_52319g0030 No alias nMAT1/2 type-I mitochondrial RNA splicing factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!