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  5. LOC_Os01g37842.1

LOC_Os01g37842.1


Description : no hits & (original description: none)


Gene families : OG0007257 (Archaeplastida) Phylogenetic Tree(s): OG0007257_tree ,
OG_05_0006839 (LandPlants) Phylogenetic Tree(s): OG_05_0006839_tree ,
OG_06_0006582 (SeedPlants) Phylogenetic Tree(s): OG_06_0006582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g37842.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT3G20430 No alias CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA... 0.05 Archaeplastida
MA_10435239g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027739_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019385 PHAX_RNA-binding_domain 104 183
No external refs found!