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  5. LOC_Os01g39830.1

LOC_Os01g39830.1


Description : beta-galactosidase (BGAL)


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0000245 (LandPlants) Phylogenetic Tree(s): OG_05_0000245_tree ,
OG_06_0001808 (SeedPlants) Phylogenetic Tree(s): OG_06_0001808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g39830.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00246870 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.12 Archaeplastida
AT2G28470 BGAL8 beta-galactosidase 8 0.02 Archaeplastida
AT2G32810 BGAL9 beta galactosidase 9 0.06 Archaeplastida
AT3G13750 BGAL1 beta galactosidase 1 0.02 Archaeplastida
AT4G35010 BGAL11 beta-galactosidase 11 0.02 Archaeplastida
AT4G36360 BGAL3 beta-galactosidase 3 0.03 Archaeplastida
Cpa|evm.model.tig00021244.28 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.01 Archaeplastida
GSVIVT01008835001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01025170001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
Gb_41532 No alias 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.03 Archaeplastida
Gb_41542 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_10427427g0010 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Pp3c9_9350V3.1 No alias beta galactosidase 9 0.02 Archaeplastida
Smo269483 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
Solyc03g019890.3.1 No alias 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.04 Archaeplastida
Solyc10g055470.2.1 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Solyc11g018500.3.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Solyc11g069270.2.1 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Zm00001e000496_P002 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Zm00001e003992_P005 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024944_P002 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Zm00001e035986_P002 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e037281_P001 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Zm00001e039014_P001 No alias beta-galactosidase (BGAL) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 749 826
IPR031330 Gly_Hdrlase_35_cat 33 337
No external refs found!