LOC_Os01g40260.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0000033 (SeedPlants) Phylogenetic Tree(s): OG_06_0000033_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g40260.1
Cluster	HCCA: Cluster_332

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00229970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00019p00249020	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AMTR_s00078p00171140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT1G29280	ATWRKY65, WRKY65	WRKY DNA-binding protein 65	0.02	Archaeplastida
AT1G69810	WRKY36, ATWRKY36	WRKY DNA-binding protein 36	0.03	Archaeplastida
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.03	Archaeplastida
AT2G03340	WRKY3	WRKY DNA-binding protein 3	0.03	Archaeplastida
AT2G23320	WRKY15	WRKY DNA-binding protein 15	0.04	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.03	Archaeplastida
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.03	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.02	Archaeplastida
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.04	Archaeplastida
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.02	Archaeplastida
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.03	Archaeplastida
GSVIVT01001286001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01019511001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01020060001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01020864001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01021252001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01028244001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_01527	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_25118	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
MA_109104g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_120697g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_124797g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_125146g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_136551g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_16118g0010	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.04	Archaeplastida
MA_740729g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_892467g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Smo29146	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Smo92733	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Solyc02g071130.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc02g080890.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc10g009550.3.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e004183_P001	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e005219_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e007834_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e011098_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e013838_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015292_P001	No alias	No annotation	0.04	Archaeplastida
Zm00001e016343_P002	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e017439_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e019418_P001	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.04	Archaeplastida
Zm00001e020229_P002	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e020279_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e022331_P001	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e025935_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e025937_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027140_P002	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.05	Archaeplastida
Zm00001e027804_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e028832_P001	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Zm00001e031518_P004	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.06	Archaeplastida
Zm00001e031901_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e032260_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e033862_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e035859_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e040369_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e042185_P001	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
BP	GO:0006090	pyruvate metabolic process	IEP	Neighborhood
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Neighborhood
BP	GO:0006096	glycolytic process	IEP	Neighborhood
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006754	ATP biosynthetic process	IEP	Neighborhood
BP	GO:0006757	ATP generation from ADP	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009166	nucleotide catabolic process	IEP	Neighborhood
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0016052	carbohydrate catabolic process	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
MF	GO:0019200	carbohydrate kinase activity	IEP	Neighborhood
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0042866	pyruvate biosynthetic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
BP	GO:0045927	positive regulation of growth	IEP	Neighborhood
BP	GO:0046031	ADP metabolic process	IEP	Neighborhood
BP	GO:0046034	ATP metabolic process	IEP	Neighborhood
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Neighborhood
BP	GO:0046434	organophosphate catabolic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
BP	GO:0046939	nucleotide phosphorylation	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Neighborhood
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	137	194

External Links

No external refs found!

LOC_Os01g40260.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation