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  5. LOC_Os01g41120.1

LOC_Os01g41120.1


Description : LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g41120.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.04 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.07 Archaeplastida
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.07 Archaeplastida
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.08 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
LOC_Os01g08470.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os02g40260.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.07 Archaeplastida
LOC_Os03g58110.1 No alias LRR-domain extensin 0.06 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.05 Archaeplastida
MA_3066179g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.03 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Smo81544 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g078560.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.06 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.05 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.06 Archaeplastida
Solyc11g005150.3.1 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.08 Archaeplastida
Zm00001e007641_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.07 Archaeplastida
Zm00001e020600_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.05 Archaeplastida
Zm00001e031217_P001 No alias Leucine-rich repeat extensin-like protein 4... 0.03 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 144 202
IPR001611 Leu-rich_rpt 286 343
No external refs found!