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  5. AMTR_s00002p00166780

AMTR_s00002p00166780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.140

Description : Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type)


Gene families : OG0000547 (Archaeplastida) Phylogenetic Tree(s): OG0000547_tree ,
OG_05_0002054 (LandPlants) Phylogenetic Tree(s): OG_05_0002054_tree ,
OG_06_0001934 (SeedPlants) Phylogenetic Tree(s): OG_06_0001934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00166780
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012155001 No alias Solute transport.carrier-mediated transport.APC... 0.06 Archaeplastida
GSVIVT01021609001 No alias Solute transport.carrier-mediated transport.APC... 0.05 Archaeplastida
LOC_Os01g11160.1 No alias cationic amino acid transporter (CAT) 0.01 Archaeplastida
LOC_Os03g43970.1 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
LOC_Os11g05690.2 No alias cationic amino acid transporter (CAT) 0.07 Archaeplastida
MA_10433254g0010 No alias Cationic amino acid transporter 1 OS=Arabidopsis... 0.06 Archaeplastida
MA_11267g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_453630g0010 No alias cationic amino acid transporter (CAT) 0.05 Archaeplastida
Solyc08g077810.2.1 No alias Cationic amino acid transporter 6, chloroplastic... 0.03 Archaeplastida
Zm00001e005030_P001 No alias cationic amino acid transporter (CAT) 0.01 Archaeplastida
Zm00001e030690_P001 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida
Zm00001e039396_P004 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!