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  5. LOC_Os01g42270.1

LOC_Os01g42270.1


Description : transcriptional co-repressor (LUG)


Gene families : OG0000691 (Archaeplastida) Phylogenetic Tree(s): OG0000691_tree ,
OG_05_0000885 (LandPlants) Phylogenetic Tree(s): OG_05_0000885_tree ,
OG_06_0001501 (SeedPlants) Phylogenetic Tree(s): OG_06_0001501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42270.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Pp3c1_3700V3.1 No alias LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006594 LisH 10 35
IPR001680 WD40_repeat 731 763
IPR001680 WD40_repeat 648 685
IPR001680 WD40_repeat 608 641
IPR001680 WD40_repeat 573 598
No external refs found!