LOC_Os01g42350.1

Description : subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g42350.1
Cluster	HCCA: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00185210	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AT1G15210	ATPDR7, PDR7	pleiotropic drug resistance 7	0.05	Archaeplastida
AT1G15520	ABCG40, PDR12,...	pleiotropic drug resistance 12	0.03	Archaeplastida
AT2G26910	PDR4, ATPDR4	pleiotropic drug resistance 4	0.04	Archaeplastida
AT2G37280	ATPDR5, PDR5	pleiotropic drug resistance 5	0.02	Archaeplastida
AT3G30842	ATPDR10, PDR10	pleiotropic drug resistance 10	0.04	Archaeplastida
AT3G53480	PIS1, ABCG37,...	pleiotropic drug resistance 9	0.04	Archaeplastida
AT4G15215	ATPDR13, PDR13	pleiotropic drug resistance 13	0.04	Archaeplastida
AT4G15230	ATPDR2, PDR2	pleiotropic drug resistance 2	0.03	Archaeplastida
GSVIVT01016993001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01016998001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017187001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017196001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017198001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017201001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01035715001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_15493	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Gb_34309	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Gb_34310	No alias	ABC transporter G family member 31 OS=Arabidopsis...	0.04	Archaeplastida
Gb_34645	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Gb_34646	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	Archaeplastida
Gb_37007	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os02g32690.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os09g16290.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_10425791g0020	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_10426781g0010	No alias	subfamily ABCG transporter	0.05	Archaeplastida
MA_10427561g0020	No alias	ABC transporter G family member 31 OS=Oryza sativa...	0.05	Archaeplastida
MA_10429038g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_10429200g0010	No alias	ABC transporter G family member 34 OS=Arabidopsis...	0.03	Archaeplastida
MA_117094g0010	No alias	no description available(sp\|h6ws94\|pdr1_pethy : 134.0)	0.03	Archaeplastida
MA_124091g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_12781g0010	No alias	ABC transporter G family member 31 OS=Oryza sativa...	0.03	Archaeplastida
MA_12965g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_135152g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_160238g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_17319g0020	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_249533g0010	No alias	ABC transporter G family member 31 OS=Arabidopsis...	0.02	Archaeplastida
MA_949447g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp1g24380.1	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Mp1g25350.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp2g07030.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp2g21800.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp4g05490.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp8g13070.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Pp3c12_17520V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c16_13830V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
Pp3c18_21520V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c19_18700V3.1	No alias	pleiotropic drug resistance 7	0.05	Archaeplastida
Pp3c4_2380V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
Pp3c5_23360V3.1	No alias	pleiotropic drug resistance 7	0.02	Archaeplastida
Pp3c5_3240V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
Smo101338	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo115821	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo122902	No alias	ABC transporter G family member 34 OS=Arabidopsis thaliana	0.02	Archaeplastida
Smo173584	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo412699	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo412710	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo417263	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo417266	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo424638	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo424639	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo441717	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo82705	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo96758	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
Solyc02g081870.4.1	No alias	abscisic acid transporter (ABCG31). subfamily ABCG transporter	0.02	Archaeplastida
Solyc05g018510.3.1	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.04	Archaeplastida
Solyc05g053610.2.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Solyc06g065670.4.1	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	Archaeplastida
Solyc08g067620.2.1	No alias	subfamily ABCG transporter	0.06	Archaeplastida
Solyc12g019620.2.1	No alias	subfamily ABCG transporter	0.11	Archaeplastida
Solyc12g019640.2.1	No alias	subfamily ABCG transporter	0.11	Archaeplastida
Solyc12g100180.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e006460_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e020667_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e024257_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e026148_P001	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Zm00001e027850_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e033689_P001	No alias	subfamily ABCG transporter	0.12	Archaeplastida
Zm00001e033690_P001	No alias	no hits & (original description: none)	0.15	Archaeplastida
Zm00001e033859_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e035120_P001	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Zm00001e039353_P001	No alias	subfamily ABCG transporter	0.17	Archaeplastida
Zm00001e040575_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005319	lipid transporter activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
BP	GO:0010274	hydrotropism	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Neighborhood
BP	GO:0042546	cell wall biogenesis	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0061024	membrane organization	IEP	Neighborhood
BP	GO:0120009	intermembrane lipid transfer	IEP	Neighborhood
MF	GO:0120013	intermembrane lipid transfer activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	899	1051
IPR029481	ABC_trans_N	118	168
IPR003439	ABC_transporter-like	194	375
IPR013581	PDR_assoc	746	811
IPR013525	ABC_2_trans	1197	1421
IPR013525	ABC_2_trans	529	741

External Links

No external refs found!

LOC_Os01g42350.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation