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  5. LOC_Os01g42380.1

LOC_Os01g42380.1


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42380.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00225530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00122p00085720 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00122p00120860 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.02 Archaeplastida
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.03 Archaeplastida
AT4G15215 ATPDR13, PDR13 pleiotropic drug resistance 13 0.03 Archaeplastida
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 Archaeplastida
GSVIVT01017185001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01017187001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017196001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01017201001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017204001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01031378001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01036184001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Gb_38109 No alias subfamily ABCG transporter 0.04 Archaeplastida
LOC_Os06g36090.1 No alias subfamily ABCG transporter 0.07 Archaeplastida
LOC_Os11g37700.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
MA_10425791g0020 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10426781g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10429200g0010 No alias ABC transporter G family member 34 OS=Arabidopsis... 0.03 Archaeplastida
MA_10432311g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10437173g0020 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_249533g0010 No alias ABC transporter G family member 31 OS=Arabidopsis... 0.02 Archaeplastida
MA_300423g0010 No alias ABC transporter G family member 36 OS=Arabidopsis... 0.03 Archaeplastida
MA_84624g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
Mp1g24380.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Pp3c18_21510V3.1 No alias pleiotropic drug resistance 12 0.02 Archaeplastida
Smo267739 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Zm00001e003743_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e020666_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e020667_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e024257_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e024978_P001 No alias subfamily ABCG transporter 0.07 Archaeplastida
Zm00001e026148_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e027850_P001 No alias subfamily ABCG transporter 0.07 Archaeplastida
Zm00001e030669_P001 No alias subfamily ABCG transporter 0.05 Archaeplastida
Zm00001e037233_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 180 362
IPR003439 ABC_transporter-like 888 1040
IPR013525 ABC_2_trans 516 727
IPR013525 ABC_2_trans 1185 1399
IPR013581 PDR_assoc 733 798
IPR029481 ABC_trans_N 105 154
No external refs found!