LOC_Os01g42410.1


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42410.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00224920 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00039p00225530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00056p00117010 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00122p00085720 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00122p00120860 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.03 Archaeplastida
AT2G29940 ATPDR3, PDR3 pleiotropic drug resistance 3 0.03 Archaeplastida
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.02 Archaeplastida
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.04 Archaeplastida
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.03 Archaeplastida
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.06 Archaeplastida
Cre04.g224500 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cre09.g395750 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01016991001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01017185001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01017187001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01017196001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01017198001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01017201001 No alias Solute transport.primary active transport.ABC... 0.08 Archaeplastida
GSVIVT01017204001 No alias Solute transport.primary active transport.ABC... 0.08 Archaeplastida
GSVIVT01031378001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01033804001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01034745001 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01034748001 No alias Solute transport.primary active transport.ABC... 0.06 Archaeplastida
GSVIVT01035715001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01036184001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_05443 No alias subfamily ABCG transporter 0.03 Archaeplastida
Gb_15493 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_30095 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_37006 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_41755 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os01g42370.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
LOC_Os06g36090.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os07g33780.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
LOC_Os09g16449.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_10427561g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10427561g0020 No alias ABC transporter G family member 31 OS=Oryza sativa... 0.02 Archaeplastida
MA_10427683g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10429185g0020 No alias ABC transporter G family member 35 OS=Arabidopsis... 0.02 Archaeplastida
MA_10429200g0010 No alias ABC transporter G family member 34 OS=Arabidopsis... 0.02 Archaeplastida
MA_10435419g0010 No alias ABC transporter G family member 35 OS=Oryza sativa... 0.02 Archaeplastida
MA_10436632g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10437173g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_105476g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_117094g0010 No alias no description available(sp|h6ws94|pdr1_pethy : 134.0) 0.03 Archaeplastida
MA_12781g0010 No alias ABC transporter G family member 31 OS=Oryza sativa... 0.03 Archaeplastida
MA_18770g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_30116g0010 No alias no description available(sp|h6ws94|pdr1_pethy : 347.0) 0.02 Archaeplastida
MA_38272g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_911577g0010 No alias ABC transporter G family member 36 OS=Arabidopsis... 0.02 Archaeplastida
Mp1g24380.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp1g25350.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g07030.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Mp4g06670.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c12_17520V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Pp3c16_13830V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 Archaeplastida
Pp3c19_18700V3.1 No alias pleiotropic drug resistance 7 0.03 Archaeplastida
Pp3c22_9340V3.1 No alias pleiotropic drug resistance 12 0.03 Archaeplastida
Pp3c4_2380V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Pp3c6_6330V3.1 No alias pleiotropic drug resistance 1 0.06 Archaeplastida
Smo101338 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo115821 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo118688 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo133564 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo412710 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo417263 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo424638 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo424639 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo429390 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo441717 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo441722 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo96729 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Smo96758 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc05g018510.3.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.05 Archaeplastida
Solyc05g053610.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc05g055330.3.1 No alias subfamily ABCG transporter 0.06 Archaeplastida
Solyc06g065670.4.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 Archaeplastida
Solyc06g076930.2.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc08g067610.3.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc08g067620.2.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Solyc09g091660.3.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Solyc09g091670.3.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Solyc12g019620.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc12g019640.2.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc12g098210.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc12g100190.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e006460_P001 No alias subfamily ABCG transporter 0.07 Archaeplastida
Zm00001e016714_P002 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e019932_P002 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e020666_P001 No alias subfamily ABCG transporter 0.05 Archaeplastida
Zm00001e020667_P001 No alias subfamily ABCG transporter 0.1 Archaeplastida
Zm00001e024257_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e026148_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e027850_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e033689_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e033690_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035120_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e037233_P001 No alias subfamily ABCG transporter 0.06 Archaeplastida
Zm00001e040575_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Neighborhood
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Neighborhood
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 91 141
IPR003439 ABC_transporter-like 873 1025
IPR013525 ABC_2_trans 1170 1384
IPR013525 ABC_2_trans 503 714
IPR013581 PDR_assoc 719 781
IPR003439 ABC_transporter-like 167 349
No external refs found!