1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g42520.1

LOC_Os01g42520.1


Description : no hits & (original description: none)


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0002309 (LandPlants) Phylogenetic Tree(s): OG_05_0002309_tree ,
OG_06_0001279 (SeedPlants) Phylogenetic Tree(s): OG_06_0001279_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42520.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00141p00087130 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00141p00103540 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G80240 No alias Protein of unknown function, DUF642 0.06 Archaeplastida
AT2G41800 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT2G41810 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT4G32460 No alias Protein of unknown function, DUF642 0.06 Archaeplastida
AT5G11420 No alias Protein of unknown function, DUF642 0.05 Archaeplastida
AT5G25460 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
Gb_04470 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_14930 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g59300.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g04050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g10620.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434741g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10435058g0020 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_169757g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_201516g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_251322g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_410230g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_4501g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_54830g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_6019571g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_770477g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_89188g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_9589g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g120040.3.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc04g015610.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc08g067030.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e006089_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007710_P003 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007711_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e007713_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e007714_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e013973_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e020676_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e041141_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006946 DUF642 26 183
IPR006946 DUF642 194 357
No external refs found!